HÄ°S776 - CELLULAR DIFFERENTIATION, ADULT & EMBRIONIC STEM C

Course Name Code Semester Theory
(hours/week)
Application
(hours/week)
Credit ECTS
CELLULAR DIFFERENTIATION, ADULT & EMBRIONIC STEM C HÄ°S776 Any Semester/Year 2 0 2 5
Prequisites-
Course languageTurkish
Course typeElective 
Mode of DeliveryFace-to-Face 
Learning and teaching strategiesLecture
Team/Group Work
Preparing and/or Presenting Reports
Problem Solving
 
Instructor (s)Prof. Petek Korkusuz, MD, PhD., Prof. Dilara Zeybek, MD., Prof. Lale Karakoç Sökmensüer, MD. 
Course objectiveEvaluation of the differentiation stages and the structural-functional regulatory mechanisms of the 200 different types of human cells on their way to gain highly specific functions. Have the ability to discuss the features, potentials and functions of embryonal and adult (mesenchymal and hematopoetic) stem cells, tissue specific progenitor cells and inducible pluripotent stem cells. Gain skills in: fertilization by assisted reproductive techniques, embryo culture and transfer, cryopreservation of gamete-embryo, the use of embryonic cells in diagnosis and scientific studies. 
Learning outcomes
  1. 1. To learn mechanisms of cellular differentiation, plasticity and, death in order to analyze the molecular-functional-structural relationships
  2. 2. To understand the structural and functıonal features of both the embryonıc and adult (mesenchymal and hematopoetıc) stem cells
  3. 3. To learn the fertliization, blastocyst formation, gastrulation processes realted to embryogenesis.
  4. 4. To gain a basic knowledge on the embryo culture, quality-evaluation and, the embryo transfer procedures.
  5. 5. To understand basic principles of cryopreservation: indications of oocyte, embryo, spermium, ovarium and testis cryopreservation.
  6. 6. To gain a basic knowledge on tissue specific progenitor cells and the inducible pluripotent stem cells.
Course Content- The tissue specific differentiation of cells owing the same genetic material but different genetic expressions under the influence of various microenvironmental signals are discussed.
- The sources, capacities, molecular and functional features of the embryonal and adult (mesenchymal, hematopoetic, IPS) stem cells with multilineage differentiation ability, are detailed with their therapeutic uses and future perspectives.
- The embryo development, culture and, quality evaluation will be detailed in addition to the cryopreservation.
- The use of embryonic and adult stem cells in clinical and scientific studies are discussed including ethical perspectives 
References1. Lanza ed.: Essentials of Stem Cell Biology,
2. Albert B., Johnson A eds.: Molecular Biology of The Cell.
3. Zon ed.: Current Protocols in Stem Cell Biology
4. Vemuri, Chase and Rao eds; Mesenchymal Stem Cell Assays and Applications
5. Ross MH, Kaye GI, Pawlina W: Histology. A Text and Atlas.
6. Carlson BM ed: Human Embryology and Developmental Biology.
7. Moore KL, Persaud TVN: The Developing Human. Clinically Oriented Embryology.
8. Gardner DK: Textbook of Assisted Reproductive Techniques.
9. Trounson A. and Gosden R: Biology and Pathology of the Oocyte
10. Veek L : An Atlas of Human Blastocysts, The Parthenon Publishing Group 

Course outline weekly

WeeksTopics
Week 1Cell cycle, proliferation and differentiation
Week 2Cell death, somatic and germ cells in their microenvironment
Week 3 Spermatogenezis and oogenezis
Week 4Definition, classification and basic properties of stem cells
Week 5Embrionic stem cells, primordial germ cells
Week 6Mesenchymal stem cells
Week 7Hematopoetic stem cells
Week 8Induced pluripotent stem cells
Week 9Molecular mechanisms in stem cell programming
Week 10Midterm exam
Week 11Sperm maturation, sperm capacitation, acrosomal reaction, gamet interaction, oocyte activation
Week 12Evaluation of fertilization, molecular mechanisms of fertilization, failure of fertilization, in vivo and in vitro embryo development, quality evaluation of the embryo, embryo-scoring,
Week 13Preimplantation genetical diagnosis, embryo culture, biopsy of embryo blastomer and polar body, embryo culture systems, and co-culture, nuclear and cytoplasmic properties of human embryos, blastocyte development and transfer
Week 14Basic principles in cryopreservation: cryopreservation of oocyte and ovarian tissue, protection of fertility, cryopreservation of embryo, spermatozoa and testicular tissue
Week 15Preparation to final exam
Week 16Final exam

Assesment methods

Course activitiesNumberPercentage
Attendance285
Laboratory00
Application00
Field activities00
Specific practical training00
Assignments00
Presentation110
Project00
Seminar110
Midterms125
Final exam150
Total100
Percentage of semester activities contributing grade succes3150
Percentage of final exam contributing grade succes150
Total100

WORKLOAD AND ECTS CALCULATION

Activities Number Duration (hour) Total Work Load
Course Duration (x14) 14 2 28
Laboratory 0 0 0
Application000
Specific practical training000
Field activities000
Study Hours Out of Class (Preliminary work, reinforcement, ect)14570
Presentation / Seminar Preparation2612
Project000
Homework assignment000
Midterms (Study duration)12020
Final Exam (Study duration) 12020
Total Workload3253150

Matrix Of The Course Learning Outcomes Versus Program Outcomes

D.9. Key Learning OutcomesContrubition level*
12345
1. Know the light and electron microscobic structure of the cells, tissues and organs; understanding the molecular and genetic components, establish the relationship between the structure function.     
2. Understanding of the molecular mechanisms regulating human embryonic development , should be able to define the developmental disorders.     
3. Know the basic techniques such as histochemistry, immunohistochemistry, electron microscopy, cell culture.     
4. Must know and apply microscopic imaging techniques together and other quantitative methods such as stereology.     
5. Must have the basic knowledge and competence necessary to perform laboratuary works such as IVF, stem cell technologies in cooperation with the clinics.    X
6. Must have knowledge, skills and attitudes that will contribute to education.     
7. Should know how to obtain information to improve self and understand the importance of continuous learning.   X 
8. Be able to put forward original hypotheses independently; plan and write original projects. X   
9. Have information and views on ethical issues on science and publication ethics and clinically related IVF and stem cell studies.  X  
10. Be capable to participate in national and international scientific environments , make presentations and discussions.X    
11. Understand the evaluation criteria of the national and international journals and evaluate an article or project independently.      

*1 Lowest, 2 Low, 3 Average, 4 High, 5 Highest