AMÄ°604 - GENETIC and EPIDEMIOLOGICAL STUDIES ON ALLERGIC DI

Course Name Code Semester Theory
(hours/week)
Application
(hours/week)
Credit ECTS
GENETIC and EPIDEMIOLOGICAL STUDIES ON ALLERGIC DI AMÄ°604 2nd Semester 2 0 2 5
PrequisitesNone
Course languageTurkish
Course typeMust 
Mode of DeliveryFace-to-Face 
Learning and teaching strategiesLecture
Discussion
Question and Answer
 
Instructor (s)Bülent ÅžEKEREL, Özge U.SOYER, U. Murat ÅžAHÄ°NER, Esra BÄ°RBEN, Betül BÃœYÃœKTÄ°RYAKÄ°, ÇaÄŸatay KARAASLAN 
Course objectiveThe purpose of this course is to teach the students about epidemiology of allergic diseases, determination of risk factors in establishment of disease and role of genetic background in development of disease, gene-environment interactions and design and application of genetic studies .  
Learning outcomes
  1. 1. Epidemiology and epidemiologic research methods in allergic diseases. 2. Genetics of allergic diseases 3. Methodology in genetic studies ( candidate gen, GWAS, positional cloning, Meta Analysis) 4. Effects of environment in allergic diseases 5. Gene-environment interaction and epigenetic research methods
Course Content Epidemiology of asthma, allergic rhinit and food allergies,
Concepts of genetic and role in allergic diseases,
Genetic studies in allergic diseases,
Study design and methodology in genetic research,
Gene ?environment interactions,
Terminology of epigenetic and epigenetic in allergic diseases
 
ReferencesMiddleton's Allergy Principlesand Practice, Eight Editions, Editors: Adkinson NF, Bochner BS, Burks W Busse WW, Holgate ST et al, 2014 Elsevier Inc., ISBN 978-0-323-08593-9
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Literature concerning related topics, to be provided to the students
 

Course outline weekly

WeeksTopics
Week 1Epidemiology of asthma (Bülent ŞEKEREL)
Week 2Epidemiology of allergic rhinitis (Ãœmit ÅžAHÄ°NER)
Week 3Epidemiology of food allergy (Betül BÜYÜKTİRYAKİ)
Week 4Genetics in allergic diseases (Esra BÄ°RBEN)
Week 5Candidate genestudies in allergic diseases (Esra BÄ°RBEN)
Week 6GWAS in allergic diseases (Esra BÄ°RBEN)
Week 7Metaanalysis in allergic diseases (Esra BÄ°RBEN)
Week 8Midterm exam
Week 9Gene-environment interactions in allergic diseases (Esra BÄ°RBEN)
Week 10Epigenetic concepts (Çağatay KARAASLAN)
Week 11Methods in epidemiologic research I (Çağatay KARAASLAN)
Week 12Methods in epidemiologic research II (Çağatay KARAASLAN)
Week 13miRNA in allergic diseases (Ãœmit ÅžAHÄ°NER)
Week 14Microbiota in allergic diseases (Özge SOYER)
Week 15Final Exam

Assesment methods

Course activitiesNumberPercentage
Attendance1410
Laboratory00
Application00
Field activities00
Specific practical training00
Assignments00
Presentation220
Project00
Seminar00
Midterms120
Final exam150
Total100
Percentage of semester activities contributing grade succes1750
Percentage of final exam contributing grade succes150
Total100

WORKLOAD AND ECTS CALCULATION

Activities Number Duration (hour) Total Work Load
Course Duration (x14) 14 2 28
Laboratory 0 0 0
Application000
Specific practical training000
Field activities000
Study Hours Out of Class (Preliminary work, reinforcement, ect)14342
Presentation / Seminar Preparation21020
Project000
Homework assignment000
Midterms (Study duration)12020
Final Exam (Study duration) 14040
Total Workload3275150

Matrix Of The Course Learning Outcomes Versus Program Outcomes

D.9. Key Learning OutcomesContrubition level*
12345
1. To gain knowledge about general features, development and pathogenesis of allergic diseases.   X  
2. To conceive the interaction between innate and adaptive immunities in allergic inflammation and to evaluate their contribution to disease pathogenesis.     
3. To learn cell types and their characteristics and roles in allergic diseases.      
4. To have information concerning genetic basis of allergic diseases and gen-enviroment interactions.     X
5. To obtain knowledge on the legal regulations and ethical approaches directed towards clinical studies, and to comply with these ethical principles, being aware of their importance at an individual level and for society    X
6. To follow new developments and Technologies in the field of allergic inflammation, to know the equipment and material used in this field and to be able to use basic molecular and cell biology techniques.     X
7. To be able to use information technology effectively in life for professional use.    X
8. To discuss at a national and international level, topics related to allergic diseases, to possess the knowledge and the capability to solve problems and to master a foreign language, in such a way that this knowledge will serve as principles of life long learning.    X 
9. To present individually or as a team opinions in a scientific environment on theoretical and practical topics, to discuss systematically with specialists, to defend and question norms, to assess the results in the framework of quality processing.   X 
10. To analyse research data obtained in allergic diseases using statistic methods, to report according to evidence or present in a national/international scientific field.   X 
11. To know the working standards of an allergic research laboratory, to implement the rules of data acquisition and scientific reporting, ethics and biosafety.   X 

*1 Lowest, 2 Low, 3 Average, 4 High, 5 Highest