ESF608 - LABORATORY METHODS IN MUSCLE PHYSIOLOGY II

Course Name Code Semester Theory
(hours/week)
Application
(hours/week)
Credit ECTS
LABORATORY METHODS IN MUSCLE PHYSIOLOGY II ESF608 Any Semester/Year 2 2 4 10
PrequisitesNone
Course languageTurkish
Course typeElective 
Mode of DeliveryFace-to-Face 
Learning and teaching strategiesLecture
Experiment
Project Design/Management
 
Instructor (s)Senay Akin, Ph.D. 
Course objectiveThis course is designed to give student, who works on muscle physiology, some laboratory techniques of muscle physiology, biochemistry and molecular biology before starting on working her/his own project. 
Learning outcomes
  1. At the end of this course student;
  2. Will be able to identify both skeletal and cardiac muscle phenotype by running gel electrophoresis.
  3. Will be able to do immunohistochemistry and western analysis on muscle samples
  4. Will be able to measure various aerobic and anaerobic and antioxidant enzyme activities, and also analyze various oxidative damage markers.
Course ContentThis course consists of both lectures and laboratory application. Basically, lectures will focus on therotical bacgrounds for the laboratory sections. Skeletal and cardiac muscle phenotype, stress response to skeletal muscle such as acute and chronic exercises, heat stress, hypoxia will be discussed. In that respect, both SDS poliacrylamide and native tube gel electrophoresis, western and immunohistochemical analysis of stress markers, antioxidant and anaerobic/aerobic enzyme activities along with the levels of oxidative muscle damage marker will be analyzed in the laboratory. 
ReferencesThere will be no suggested textbook. On the other hand, methods parts of various papers will be used as a course material. 

Course outline weekly

WeeksTopics
Week 1General principles of SDS gel electrophoresis
Week 2Prepareation of muscle samples for SDS gel electrophoresis
Week 3Isolation of skeletal muscle MHC?s by using SDS gel electrophoresis.
Week 4Isolation of skeletal muscle MLC?sby using SDS gel electrophoresis
Week 5Isolation of cardiac muscle myosin by using native gel electrophoresis
Week 6Assessment of muscle phenotype
Week 7Various stress models: Exercise training, hypoxia, heat
Week 8Immunohistochemistry
Week 9Western analysis
Week 10Western analysis
Week 11Measurement of citrate synthase enzyme activity
Week 12Measurement of myofibrillar ATPase activity
Week 13Measurement of SOD/GPx activities
Week 14Measurement of protein carbonyl in muscle tissue; Measurement of lipid peroxidation in muscle tissue
Week 15Preparation to final exam
Week 16Final exam

Assesment methods

Course activitiesNumberPercentage
Attendance
Laboratory
Application
Field activities
Specific practical training
Assignments
Presentation
Project
Seminar
Midterms
Final exam
Total
Percentage of semester activities contributing grade succes
Percentage of final exam contributing grade succes
Total

WORKLOAD AND ECTS CALCULATION

Activities Number Duration (hour) Total Work Load
Course Duration (x14) 0
Laboratory 0
Application0
Specific practical training0
Field activities0
Study Hours Out of Class (Preliminary work, reinforcement, ect)0
Presentation / Seminar Preparation0
Project0
Homework assignment0
Midterms (Study duration)0
Final Exam (Study duration) 0
Total Workload000

Matrix Of The Course Learning Outcomes Versus Program Outcomes

D.9. Key Learning OutcomesContrubition level*
12345
1. Students will be able to follow the conceptual and scientific developments related to basic measurement and evaluation techniques specific to the Exercise and Sports Physiology, and use the deep and systematic knowledge specific to the field of Exercise and Sports Physiology in their professional and academic studies.   X 
2. Has the laboratory safety and technical knowledge and skills required for laboratory studies in Exercise and Sport Physiology, and able to solve the research problems using the tools and equipment in the field.    X
3. Has the competency to analyse and integrate the information from other disciplines, synthesize new information, make decisions and solve problems by using theoretical and applied concepts and principles in Exercise and Sport Physiology with a critical approach.    X
4. Has the competency to conduct research, take part in research projects, chose the appropriate statistical methods, interpret the results of his/her work, write the report and present it in scientific meetings or publish.    X
5. Evaluates national/international strategies, politics and practices related to Exercise and Sports Physiology in line with the national values and country realities.   X 
6. Acts in compliance with legislation, professional values and ethical principles in the formation of knowledge related to Exercise and Sports Physiology, and transfers his/her professional knowledge, skills and responsibilities to team work.    X
7. Reads and analyses the scientific papers in Exercise and Sports Physiology, conducts and carries out evidenced based research in the concerned professional field.    X
8. Knows the importance of communication with other sciences related to Exercise and Sport Physiology, uses his/her knowledge and problem solving abilities in interdisciplinary studies.   X 
9. Adopts lifelong learning principles, identifies his/her learning needs and goals, and contributes to quality improvement, vocational training and promotion programs in Exercise and Sports Physiology.   X 
10. Establishes written, verbal and visual communication with national and international scientists and defends his/her opinions on the issues in Exercise and Sports Physiology.    X

*1 Lowest, 2 Low, 3 Average, 4 High, 5 Highest